Genetic diversity in red clover (trifolium pratense l.) Using SSR markers
2014
Аутори
Ahsyee, Salem R.Vasiljević, Sanja
Ćalić, Irena
Zorić, Miroslav
Karagić, Đura
Šurlan-Momirović, Gordana
Чланак у часопису (Објављена верзија)
Метаподаци
Приказ свих података о документуАпстракт
Red clover (Trifolium pratense L.) is one of the main forage species from temperate regions and it's originated in Eurasia where wild-type populations are found in the Caucasus Mountains. Considerable variation for this crop has been recorded for few molecular variations. The identification and understanding of molecular genetic diversity in red clover accessions will help in effective genetic conservation along with efficient breeding programs in this crop. This study has shown molecular diversity using microsatellite markers in red clover accessions from around of the world. In this investigation, 40 genotypes have been selected and analyzed using 15 SSR primers. These primer pairs amplified 1146 polymorphic loci among the genotypes screened. The number of fragments amplified by each SSR primer combination varied from 24 for RCS3681 to 109 for RCS1729 with an average value of 80.78 per primer combination. The SSR marker data was further analyzed using cluster algorithms and Principal... coordinates analysis (PCoA). The results indicated that the considerable genetic variations were discovered among the analyzed genotypes. The SSR based clustering could identify the putative pedigree types of the present red clover types of diverse origins
Кључне речи:
cluster analysis / genetic distance / genetic variation / principal coordinates analysis / red clover / SSR molecular markersИзвор:
Genetika-Belgrade, 2014, 46, 3, 949-961Издавач:
- Društvo genetičara Srbije, Beograd
Финансирање / пројекти:
- Повећање тржишног значаја крмних биљака оплемењивањем и оптимизацијом технологије производње семена (RS-MESTD-Technological Development (TD or TR)-31024)
- Ministry of Higher Education and Scientific Research of the State of Libya
DOI: 10.2298/GENSR1403949A
ISSN: 0534-0012
WoS: 000348608200027
Scopus: 2-s2.0-84922125920
Колекције
Институција/група
FiVeRTY - JOUR AU - Ahsyee, Salem R. AU - Vasiljević, Sanja AU - Ćalić, Irena AU - Zorić, Miroslav AU - Karagić, Đura AU - Šurlan-Momirović, Gordana PY - 2014 UR - http://fiver.ifvcns.rs/handle/123456789/1378 AB - Red clover (Trifolium pratense L.) is one of the main forage species from temperate regions and it's originated in Eurasia where wild-type populations are found in the Caucasus Mountains. Considerable variation for this crop has been recorded for few molecular variations. The identification and understanding of molecular genetic diversity in red clover accessions will help in effective genetic conservation along with efficient breeding programs in this crop. This study has shown molecular diversity using microsatellite markers in red clover accessions from around of the world. In this investigation, 40 genotypes have been selected and analyzed using 15 SSR primers. These primer pairs amplified 1146 polymorphic loci among the genotypes screened. The number of fragments amplified by each SSR primer combination varied from 24 for RCS3681 to 109 for RCS1729 with an average value of 80.78 per primer combination. The SSR marker data was further analyzed using cluster algorithms and Principal coordinates analysis (PCoA). The results indicated that the considerable genetic variations were discovered among the analyzed genotypes. The SSR based clustering could identify the putative pedigree types of the present red clover types of diverse origins PB - Društvo genetičara Srbije, Beograd T2 - Genetika-Belgrade T1 - Genetic diversity in red clover (trifolium pratense l.) Using SSR markers EP - 961 IS - 3 SP - 949 VL - 46 DO - 10.2298/GENSR1403949A ER -
@article{ author = "Ahsyee, Salem R. and Vasiljević, Sanja and Ćalić, Irena and Zorić, Miroslav and Karagić, Đura and Šurlan-Momirović, Gordana", year = "2014", abstract = "Red clover (Trifolium pratense L.) is one of the main forage species from temperate regions and it's originated in Eurasia where wild-type populations are found in the Caucasus Mountains. Considerable variation for this crop has been recorded for few molecular variations. The identification and understanding of molecular genetic diversity in red clover accessions will help in effective genetic conservation along with efficient breeding programs in this crop. This study has shown molecular diversity using microsatellite markers in red clover accessions from around of the world. In this investigation, 40 genotypes have been selected and analyzed using 15 SSR primers. These primer pairs amplified 1146 polymorphic loci among the genotypes screened. The number of fragments amplified by each SSR primer combination varied from 24 for RCS3681 to 109 for RCS1729 with an average value of 80.78 per primer combination. The SSR marker data was further analyzed using cluster algorithms and Principal coordinates analysis (PCoA). The results indicated that the considerable genetic variations were discovered among the analyzed genotypes. The SSR based clustering could identify the putative pedigree types of the present red clover types of diverse origins", publisher = "Društvo genetičara Srbije, Beograd", journal = "Genetika-Belgrade", title = "Genetic diversity in red clover (trifolium pratense l.) Using SSR markers", pages = "961-949", number = "3", volume = "46", doi = "10.2298/GENSR1403949A" }
Ahsyee, S. R., Vasiljević, S., Ćalić, I., Zorić, M., Karagić, Đ.,& Šurlan-Momirović, G.. (2014). Genetic diversity in red clover (trifolium pratense l.) Using SSR markers. in Genetika-Belgrade Društvo genetičara Srbije, Beograd., 46(3), 949-961. https://doi.org/10.2298/GENSR1403949A
Ahsyee SR, Vasiljević S, Ćalić I, Zorić M, Karagić Đ, Šurlan-Momirović G. Genetic diversity in red clover (trifolium pratense l.) Using SSR markers. in Genetika-Belgrade. 2014;46(3):949-961. doi:10.2298/GENSR1403949A .
Ahsyee, Salem R., Vasiljević, Sanja, Ćalić, Irena, Zorić, Miroslav, Karagić, Đura, Šurlan-Momirović, Gordana, "Genetic diversity in red clover (trifolium pratense l.) Using SSR markers" in Genetika-Belgrade, 46, no. 3 (2014):949-961, https://doi.org/10.2298/GENSR1403949A . .