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CROPINNO – Introducing multi-omics tools for improved crop stress resilience

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2022
DM.pdf (1.107Mb)
Authors
Miladinović, Dragana
Kondić-Špika, Ankica
Zeremski, Tijana
Cvejić, Sandra
Gvozdenac, Sonja
Dedić, Boško
Jocić, Siniša
Radanović, Aleksandra
Marjanović-Jeromela, Ana
Miladinović, Jegor
Đorđević, Vuk
Tomičić, Marina
Bekavac, Goran
Tančić-Živanov, Sonja
Mirosavljević, Milan
Ovuka, Jelena
Jocković, Milan
Hladni, Nada
Kiprovski, Biljana
Mikić, Sanja
Trkulja, Dragana
Glogovac, Svetlana
Miklič, Vladimir
Dušanić, Nenad
Radić, Velimir
Grahovac, Nada
Rajković, Dragana
Ćuk, Nemanja
Takač, Verica
Krstić, Miloš
Conference object (Published version)
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Abstract
Agriculture is one of the “victims” of climate change and one of the most severely affected sectors. It has become evident that as the climate changes, crop production strategies must change as well, including primarily adaptations through breeding and crop management. In the future, it is expected that integrative approaches that combine -omics technologies by using bioinformatic tools will facilitate the identification of target genes and markers for complex traits and facilitate crop adaptation to the changing environment. Within its activities, Twinning project CROPINNO will implement at and validate different phenotyping and multi-omics tools in breeding for improved stress resilience. Sunflower is chosen as a model crop for validation of different tools and approaches since it is considered as potential model crop for adaptation to a changing environment. Activities within CROPINNO are aimed at: i) pre-screening sunflower genotypes from IFVCNS collection using for biotic and abio...tic stress resilience using different phenotyping methods; ii) study of effects of drought on sunflower plants at chromatin and transcriptional level; iii) performing whole genome SNP analysis in order to develop SNP-based markers for drought stress resilience; iv) performing integrated data analysis and comparative bioinformatics for drought responses in order to unveil possible direct correlations between stress-induced genes transcriptional variation and histone modification levels and design of networks of candidate genes for sunflower drought tolerance. Models, tools and know-how developed on sunflower will be transferred and implemented in the breeding programs of other main field crops at IFVCNS and Western Balkans region.

Keywords:
crops / multi-omics / resilience / breeding
Source:
Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade, 2022, 74-74
Publisher:
  • Belgrade : Serbian Plant Physiology Society
  • Belgrade : University of Belgrade, Institute for Biological Research „Siniša Stanković“
  • Belgrade : University of Belgrade, Faculty of Biology
Funding / projects:
  • Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 200032 (Institute of Field and Vegetable Crops, Novi Sad) (RS-200032)
  • SmartSun - Creating climate smart sunflower for future challenges (RS-7732457)
  • CA19125 COST Action EPI-CATCH

ISBN: 978-86-912591-6-7

[ Google Scholar ]
Handle
https://hdl.handle.net/21.15107/rcub_fiver_3101
URI
http://fiver.ifvcns.rs/handle/123456789/3101
Collections
  • Radovi istraživača / Researchers' papers
Institution/Community
FiVeR
TY  - CONF
AU  - Miladinović, Dragana
AU  - Kondić-Špika, Ankica
AU  - Zeremski, Tijana
AU  - Cvejić, Sandra
AU  - Gvozdenac, Sonja
AU  - Dedić, Boško
AU  - Jocić, Siniša
AU  - Radanović, Aleksandra
AU  - Marjanović-Jeromela, Ana
AU  - Miladinović, Jegor
AU  - Đorđević, Vuk
AU  - Tomičić, Marina
AU  - Bekavac, Goran
AU  - Tančić-Živanov, Sonja
AU  - Mirosavljević, Milan
AU  - Ovuka, Jelena
AU  - Jocković, Milan
AU  - Hladni, Nada
AU  - Kiprovski, Biljana
AU  - Mikić, Sanja
AU  - Trkulja, Dragana
AU  - Glogovac, Svetlana
AU  - Miklič, Vladimir
AU  - Dušanić, Nenad
AU  - Radić, Velimir
AU  - Grahovac, Nada
AU  - Rajković, Dragana
AU  - Ćuk, Nemanja
AU  - Takač, Verica
AU  - Krstić, Miloš
PY  - 2022
UR  - http://fiver.ifvcns.rs/handle/123456789/3101
AB  - Agriculture is one of the “victims” of climate change and one of the most severely affected sectors. It has become evident that as the climate changes, crop production strategies must change as well, including primarily adaptations through breeding and crop management. In the future, it is expected that integrative approaches that combine -omics technologies by using bioinformatic tools will facilitate the identification of target genes and markers for complex traits and facilitate crop adaptation to the changing environment. Within its activities, Twinning project CROPINNO will implement at and validate different phenotyping and multi-omics tools in breeding for improved stress resilience. Sunflower is chosen as a model crop for validation of different tools and approaches since it is considered as potential model crop for adaptation to a changing environment. Activities within CROPINNO are aimed at: i) pre-screening sunflower genotypes from IFVCNS collection using for biotic and abiotic stress resilience using different phenotyping methods; ii) study of effects of drought on sunflower plants at chromatin and transcriptional level; iii) performing whole genome SNP analysis in order to develop SNP-based markers for drought stress resilience; iv) performing integrated data analysis and comparative bioinformatics for drought responses in order to unveil possible direct correlations between stress-induced genes transcriptional variation and histone modification levels and design of networks of candidate genes for sunflower drought tolerance. Models, tools and know-how developed on sunflower will be transferred and implemented in the breeding programs of other main field crops at IFVCNS and Western Balkans region.
PB  - Belgrade : Serbian Plant Physiology Society
PB  - Belgrade : University of Belgrade, Institute for Biological Research „Siniša Stanković“
PB  - Belgrade : University of Belgrade, Faculty of Biology
C3  - Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade
T1  - CROPINNO – Introducing multi-omics tools for improved crop stress resilience
EP  - 74
SP  - 74
UR  - https://hdl.handle.net/21.15107/rcub_fiver_3101
ER  - 
@conference{
author = "Miladinović, Dragana and Kondić-Špika, Ankica and Zeremski, Tijana and Cvejić, Sandra and Gvozdenac, Sonja and Dedić, Boško and Jocić, Siniša and Radanović, Aleksandra and Marjanović-Jeromela, Ana and Miladinović, Jegor and Đorđević, Vuk and Tomičić, Marina and Bekavac, Goran and Tančić-Živanov, Sonja and Mirosavljević, Milan and Ovuka, Jelena and Jocković, Milan and Hladni, Nada and Kiprovski, Biljana and Mikić, Sanja and Trkulja, Dragana and Glogovac, Svetlana and Miklič, Vladimir and Dušanić, Nenad and Radić, Velimir and Grahovac, Nada and Rajković, Dragana and Ćuk, Nemanja and Takač, Verica and Krstić, Miloš",
year = "2022",
abstract = "Agriculture is one of the “victims” of climate change and one of the most severely affected sectors. It has become evident that as the climate changes, crop production strategies must change as well, including primarily adaptations through breeding and crop management. In the future, it is expected that integrative approaches that combine -omics technologies by using bioinformatic tools will facilitate the identification of target genes and markers for complex traits and facilitate crop adaptation to the changing environment. Within its activities, Twinning project CROPINNO will implement at and validate different phenotyping and multi-omics tools in breeding for improved stress resilience. Sunflower is chosen as a model crop for validation of different tools and approaches since it is considered as potential model crop for adaptation to a changing environment. Activities within CROPINNO are aimed at: i) pre-screening sunflower genotypes from IFVCNS collection using for biotic and abiotic stress resilience using different phenotyping methods; ii) study of effects of drought on sunflower plants at chromatin and transcriptional level; iii) performing whole genome SNP analysis in order to develop SNP-based markers for drought stress resilience; iv) performing integrated data analysis and comparative bioinformatics for drought responses in order to unveil possible direct correlations between stress-induced genes transcriptional variation and histone modification levels and design of networks of candidate genes for sunflower drought tolerance. Models, tools and know-how developed on sunflower will be transferred and implemented in the breeding programs of other main field crops at IFVCNS and Western Balkans region.",
publisher = "Belgrade : Serbian Plant Physiology Society, Belgrade : University of Belgrade, Institute for Biological Research „Siniša Stanković“, Belgrade : University of Belgrade, Faculty of Biology",
journal = "Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade",
title = "CROPINNO – Introducing multi-omics tools for improved crop stress resilience",
pages = "74-74",
url = "https://hdl.handle.net/21.15107/rcub_fiver_3101"
}
Miladinović, D., Kondić-Špika, A., Zeremski, T., Cvejić, S., Gvozdenac, S., Dedić, B., Jocić, S., Radanović, A., Marjanović-Jeromela, A., Miladinović, J., Đorđević, V., Tomičić, M., Bekavac, G., Tančić-Živanov, S., Mirosavljević, M., Ovuka, J., Jocković, M., Hladni, N., Kiprovski, B., Mikić, S., Trkulja, D., Glogovac, S., Miklič, V., Dušanić, N., Radić, V., Grahovac, N., Rajković, D., Ćuk, N., Takač, V.,& Krstić, M.. (2022). CROPINNO – Introducing multi-omics tools for improved crop stress resilience. in Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade
Belgrade : Serbian Plant Physiology Society., 74-74.
https://hdl.handle.net/21.15107/rcub_fiver_3101
Miladinović D, Kondić-Špika A, Zeremski T, Cvejić S, Gvozdenac S, Dedić B, Jocić S, Radanović A, Marjanović-Jeromela A, Miladinović J, Đorđević V, Tomičić M, Bekavac G, Tančić-Živanov S, Mirosavljević M, Ovuka J, Jocković M, Hladni N, Kiprovski B, Mikić S, Trkulja D, Glogovac S, Miklič V, Dušanić N, Radić V, Grahovac N, Rajković D, Ćuk N, Takač V, Krstić M. CROPINNO – Introducing multi-omics tools for improved crop stress resilience. in Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade. 2022;:74-74.
https://hdl.handle.net/21.15107/rcub_fiver_3101 .
Miladinović, Dragana, Kondić-Špika, Ankica, Zeremski, Tijana, Cvejić, Sandra, Gvozdenac, Sonja, Dedić, Boško, Jocić, Siniša, Radanović, Aleksandra, Marjanović-Jeromela, Ana, Miladinović, Jegor, Đorđević, Vuk, Tomičić, Marina, Bekavac, Goran, Tančić-Živanov, Sonja, Mirosavljević, Milan, Ovuka, Jelena, Jocković, Milan, Hladni, Nada, Kiprovski, Biljana, Mikić, Sanja, Trkulja, Dragana, Glogovac, Svetlana, Miklič, Vladimir, Dušanić, Nenad, Radić, Velimir, Grahovac, Nada, Rajković, Dragana, Ćuk, Nemanja, Takač, Verica, Krstić, Miloš, "CROPINNO – Introducing multi-omics tools for improved crop stress resilience" in Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade (2022):74-74,
https://hdl.handle.net/21.15107/rcub_fiver_3101 .

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