CROPINNO – Introducing multi-omics tools for improved crop stress resilience

2022
Authors
Miladinović, Dragana
Kondić-Špika, Ankica

Zeremski, Tijana

Cvejić, Sandra

Gvozdenac, Sonja

Dedić, Boško

Jocić, Siniša

Radanović, Aleksandra

Marjanović-Jeromela, Ana

Miladinović, Jegor

Đorđević, Vuk

Tomičić, Marina
Bekavac, Goran

Tančić-Živanov, Sonja

Mirosavljević, Milan

Ovuka, Jelena

Jocković, Milan

Hladni, Nada

Kiprovski, Biljana

Mikić, Sanja

Trkulja, Dragana

Glogovac, Svetlana

Miklič, Vladimir

Dušanić, Nenad

Radić, Velimir

Grahovac, Nada

Rajković, Dragana

Ćuk, Nemanja

Takač, Verica

Krstić, Miloš

Conference object (Published version)
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Agriculture is one of the “victims” of climate change and one of the most severely affected sectors. It has become evident that as the climate changes, crop production strategies must change as well, including primarily adaptations through breeding and crop management. In the future, it is expected that integrative approaches that combine -omics technologies by using bioinformatic tools will facilitate the identification of target genes and markers for complex traits and facilitate crop adaptation to the changing environment. Within its activities, Twinning project CROPINNO will implement at and validate different phenotyping and multi-omics tools in breeding for improved stress resilience. Sunflower is chosen as a model crop for validation of different tools and approaches since it is considered as potential model crop for adaptation to a changing environment. Activities within CROPINNO are aimed at: i) pre-screening sunflower genotypes from IFVCNS collection using for biotic and abio...tic stress resilience using different phenotyping methods; ii) study of effects of drought on sunflower plants at chromatin and transcriptional level; iii) performing whole genome SNP analysis in order to develop SNP-based markers for drought stress resilience; iv) performing integrated data analysis and comparative bioinformatics for drought responses in order to unveil possible direct correlations between stress-induced genes transcriptional variation and histone modification levels and design of networks of candidate genes for sunflower drought tolerance. Models, tools and know-how developed on sunflower will be transferred and implemented in the breeding programs of other main field crops at IFVCNS and Western Balkans region.
Keywords:
crops / multi-omics / resilience / breedingSource:
Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade, 2022, 74-74Publisher:
- Belgrade : Serbian Plant Physiology Society
- Belgrade : University of Belgrade, Institute for Biological Research „Siniša Stanković“
- Belgrade : University of Belgrade, Faculty of Biology
Funding / projects:
- Ministry of Education, Science and Technological Development, Republic of Serbia, Grant no. 200032 (Institute of Field and Vegetable Crops, Novi Sad) (RS-200032)
- SmartSun - Creating climate smart sunflower for future challenges (RS-7732457)
- CA19125 COST Action EPI-CATCH
Collections
Institution/Community
FiVeRTY - CONF AU - Miladinović, Dragana AU - Kondić-Špika, Ankica AU - Zeremski, Tijana AU - Cvejić, Sandra AU - Gvozdenac, Sonja AU - Dedić, Boško AU - Jocić, Siniša AU - Radanović, Aleksandra AU - Marjanović-Jeromela, Ana AU - Miladinović, Jegor AU - Đorđević, Vuk AU - Tomičić, Marina AU - Bekavac, Goran AU - Tančić-Živanov, Sonja AU - Mirosavljević, Milan AU - Ovuka, Jelena AU - Jocković, Milan AU - Hladni, Nada AU - Kiprovski, Biljana AU - Mikić, Sanja AU - Trkulja, Dragana AU - Glogovac, Svetlana AU - Miklič, Vladimir AU - Dušanić, Nenad AU - Radić, Velimir AU - Grahovac, Nada AU - Rajković, Dragana AU - Ćuk, Nemanja AU - Takač, Verica AU - Krstić, Miloš PY - 2022 UR - http://fiver.ifvcns.rs/handle/123456789/3101 AB - Agriculture is one of the “victims” of climate change and one of the most severely affected sectors. It has become evident that as the climate changes, crop production strategies must change as well, including primarily adaptations through breeding and crop management. In the future, it is expected that integrative approaches that combine -omics technologies by using bioinformatic tools will facilitate the identification of target genes and markers for complex traits and facilitate crop adaptation to the changing environment. Within its activities, Twinning project CROPINNO will implement at and validate different phenotyping and multi-omics tools in breeding for improved stress resilience. Sunflower is chosen as a model crop for validation of different tools and approaches since it is considered as potential model crop for adaptation to a changing environment. Activities within CROPINNO are aimed at: i) pre-screening sunflower genotypes from IFVCNS collection using for biotic and abiotic stress resilience using different phenotyping methods; ii) study of effects of drought on sunflower plants at chromatin and transcriptional level; iii) performing whole genome SNP analysis in order to develop SNP-based markers for drought stress resilience; iv) performing integrated data analysis and comparative bioinformatics for drought responses in order to unveil possible direct correlations between stress-induced genes transcriptional variation and histone modification levels and design of networks of candidate genes for sunflower drought tolerance. Models, tools and know-how developed on sunflower will be transferred and implemented in the breeding programs of other main field crops at IFVCNS and Western Balkans region. PB - Belgrade : Serbian Plant Physiology Society PB - Belgrade : University of Belgrade, Institute for Biological Research „Siniša Stanković“ PB - Belgrade : University of Belgrade, Faculty of Biology C3 - Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade T1 - CROPINNO – Introducing multi-omics tools for improved crop stress resilience EP - 74 SP - 74 UR - https://hdl.handle.net/21.15107/rcub_fiver_3101 ER -
@conference{ author = "Miladinović, Dragana and Kondić-Špika, Ankica and Zeremski, Tijana and Cvejić, Sandra and Gvozdenac, Sonja and Dedić, Boško and Jocić, Siniša and Radanović, Aleksandra and Marjanović-Jeromela, Ana and Miladinović, Jegor and Đorđević, Vuk and Tomičić, Marina and Bekavac, Goran and Tančić-Živanov, Sonja and Mirosavljević, Milan and Ovuka, Jelena and Jocković, Milan and Hladni, Nada and Kiprovski, Biljana and Mikić, Sanja and Trkulja, Dragana and Glogovac, Svetlana and Miklič, Vladimir and Dušanić, Nenad and Radić, Velimir and Grahovac, Nada and Rajković, Dragana and Ćuk, Nemanja and Takač, Verica and Krstić, Miloš", year = "2022", abstract = "Agriculture is one of the “victims” of climate change and one of the most severely affected sectors. It has become evident that as the climate changes, crop production strategies must change as well, including primarily adaptations through breeding and crop management. In the future, it is expected that integrative approaches that combine -omics technologies by using bioinformatic tools will facilitate the identification of target genes and markers for complex traits and facilitate crop adaptation to the changing environment. Within its activities, Twinning project CROPINNO will implement at and validate different phenotyping and multi-omics tools in breeding for improved stress resilience. Sunflower is chosen as a model crop for validation of different tools and approaches since it is considered as potential model crop for adaptation to a changing environment. Activities within CROPINNO are aimed at: i) pre-screening sunflower genotypes from IFVCNS collection using for biotic and abiotic stress resilience using different phenotyping methods; ii) study of effects of drought on sunflower plants at chromatin and transcriptional level; iii) performing whole genome SNP analysis in order to develop SNP-based markers for drought stress resilience; iv) performing integrated data analysis and comparative bioinformatics for drought responses in order to unveil possible direct correlations between stress-induced genes transcriptional variation and histone modification levels and design of networks of candidate genes for sunflower drought tolerance. Models, tools and know-how developed on sunflower will be transferred and implemented in the breeding programs of other main field crops at IFVCNS and Western Balkans region.", publisher = "Belgrade : Serbian Plant Physiology Society, Belgrade : University of Belgrade, Institute for Biological Research „Siniša Stanković“, Belgrade : University of Belgrade, Faculty of Biology", journal = "Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade", title = "CROPINNO – Introducing multi-omics tools for improved crop stress resilience", pages = "74-74", url = "https://hdl.handle.net/21.15107/rcub_fiver_3101" }
Miladinović, D., Kondić-Špika, A., Zeremski, T., Cvejić, S., Gvozdenac, S., Dedić, B., Jocić, S., Radanović, A., Marjanović-Jeromela, A., Miladinović, J., Đorđević, V., Tomičić, M., Bekavac, G., Tančić-Živanov, S., Mirosavljević, M., Ovuka, J., Jocković, M., Hladni, N., Kiprovski, B., Mikić, S., Trkulja, D., Glogovac, S., Miklič, V., Dušanić, N., Radić, V., Grahovac, N., Rajković, D., Ćuk, N., Takač, V.,& Krstić, M.. (2022). CROPINNO – Introducing multi-omics tools for improved crop stress resilience. in Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade Belgrade : Serbian Plant Physiology Society., 74-74. https://hdl.handle.net/21.15107/rcub_fiver_3101
Miladinović D, Kondić-Špika A, Zeremski T, Cvejić S, Gvozdenac S, Dedić B, Jocić S, Radanović A, Marjanović-Jeromela A, Miladinović J, Đorđević V, Tomičić M, Bekavac G, Tančić-Živanov S, Mirosavljević M, Ovuka J, Jocković M, Hladni N, Kiprovski B, Mikić S, Trkulja D, Glogovac S, Miklič V, Dušanić N, Radić V, Grahovac N, Rajković D, Ćuk N, Takač V, Krstić M. CROPINNO – Introducing multi-omics tools for improved crop stress resilience. in Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade. 2022;:74-74. https://hdl.handle.net/21.15107/rcub_fiver_3101 .
Miladinović, Dragana, Kondić-Špika, Ankica, Zeremski, Tijana, Cvejić, Sandra, Gvozdenac, Sonja, Dedić, Boško, Jocić, Siniša, Radanović, Aleksandra, Marjanović-Jeromela, Ana, Miladinović, Jegor, Đorđević, Vuk, Tomičić, Marina, Bekavac, Goran, Tančić-Živanov, Sonja, Mirosavljević, Milan, Ovuka, Jelena, Jocković, Milan, Hladni, Nada, Kiprovski, Biljana, Mikić, Sanja, Trkulja, Dragana, Glogovac, Svetlana, Miklič, Vladimir, Dušanić, Nenad, Radić, Velimir, Grahovac, Nada, Rajković, Dragana, Ćuk, Nemanja, Takač, Verica, Krstić, Miloš, "CROPINNO – Introducing multi-omics tools for improved crop stress resilience" in Book of Abstracts, 4th International Conference on Plant Biology (23rd SPPS Meeting), 6-8 October 2022, Belgrade (2022):74-74, https://hdl.handle.net/21.15107/rcub_fiver_3101 .