TY  - JOUR
AU  - Akhtar, Kashif
AU  - ul Ain, Noor
AU  - Prasad, P. V. Vara
AU  - Naz, Misbah
AU  - Aslam, Mehtab Muhammad
AU  - Đalović, Ivica
AU  - Riaz, Muhammad
AU  - Ahmad, Shakeel
AU  - Varshney, Rajeev K.
AU  - He, Bing
AU  - Wen, Ronghui
PY  - 2024
UR  - http://fiver.ifvcns.rs/handle/123456789/4650
AB  - Nitrogen (N) as an inorganic macronutrient is inevitable for plant growth, development, and biomass production. Many external factors and stresses, such as acidity, alkalinity, salinity, temperature, oxygen, and rainfall, affect N uptake and metabolism in plants. The uptake of ammonium (NH4+) and nitrate (NO3−) in plants mainly depends on soil properties. Under the sufficient availability of NO3− (>1 mM), low-affinity transport system is activated by gene network NRT1, and under low NO3− availability (<1 mM), high-affinity transport system starts functioning encoded by NRT2 family of genes. Further, under limited N supply due to edaphic and climatic factors, higher expression of the AtNRT2.4 and AtNRT2.5T genes of the NRT2 family occur and are considered as N remobilizing genes. The NH4+ ion is the final form of N assimilated by cells mediated through the key enzymes glutamine synthetase and glutamate synthase. The WRKY1 is a major transcription factor of the N regulation network in plants. However, the transcriptome and metabolite profiles show variations in N assimilation metabolites, including glycine, glutamine, and aspartate, under abiotic stresses. The overexpression of NO3− transporters (OsNRT2.3a and OsNRT1.1b) can significantly improve the biomass and yield of various crops. Altering the expression levels of genes could be a valuable tool to improve N metabolism under the challenging conditions of soil and environment, such as unfavorable temperature, drought, salinity, heavy metals, and nutrient stress.
PB  - Wiley Periodicals LLC
PB  - Crop Science Society of America
T2  - The Plant Genome
T1  - Physiological, molecular, and environmental insights into plant nitrogen uptake, and metabolism under abiotic stresses
SP  - e20461
DO  - 10.1002/tpg2.20461
ER  - 

@article{
author = "Akhtar, Kashif and ul Ain, Noor and Prasad, P. V. Vara and Naz, Misbah and Aslam, Mehtab Muhammad and Đalović, Ivica and Riaz, Muhammad and Ahmad, Shakeel and Varshney, Rajeev K. and He, Bing and Wen, Ronghui",
year = "2024",
abstract = "Nitrogen (N) as an inorganic macronutrient is inevitable for plant growth, development, and biomass production. Many external factors and stresses, such as acidity, alkalinity, salinity, temperature, oxygen, and rainfall, affect N uptake and metabolism in plants. The uptake of ammonium (NH4+) and nitrate (NO3−) in plants mainly depends on soil properties. Under the sufficient availability of NO3− (>1 mM), low-affinity transport system is activated by gene network NRT1, and under low NO3− availability (<1 mM), high-affinity transport system starts functioning encoded by NRT2 family of genes. Further, under limited N supply due to edaphic and climatic factors, higher expression of the AtNRT2.4 and AtNRT2.5T genes of the NRT2 family occur and are considered as N remobilizing genes. The NH4+ ion is the final form of N assimilated by cells mediated through the key enzymes glutamine synthetase and glutamate synthase. The WRKY1 is a major transcription factor of the N regulation network in plants. However, the transcriptome and metabolite profiles show variations in N assimilation metabolites, including glycine, glutamine, and aspartate, under abiotic stresses. The overexpression of NO3− transporters (OsNRT2.3a and OsNRT1.1b) can significantly improve the biomass and yield of various crops. Altering the expression levels of genes could be a valuable tool to improve N metabolism under the challenging conditions of soil and environment, such as unfavorable temperature, drought, salinity, heavy metals, and nutrient stress.",
publisher = "Wiley Periodicals LLC, Crop Science Society of America",
journal = "The Plant Genome",
title = "Physiological, molecular, and environmental insights into plant nitrogen uptake, and metabolism under abiotic stresses",
pages = "e20461",
doi = "10.1002/tpg2.20461"
}

Akhtar, K., ul Ain, N., Prasad, P. V. V., Naz, M., Aslam, M. M., Đalović, I., Riaz, M., Ahmad, S., Varshney, R. K., He, B.,& Wen, R.. (2024). Physiological, molecular, and environmental insights into plant nitrogen uptake, and metabolism under abiotic stresses. in The Plant Genome
Wiley Periodicals LLC., e20461.
https://doi.org/10.1002/tpg2.20461

Akhtar K, ul Ain N, Prasad PVV, Naz M, Aslam MM, Đalović I, Riaz M, Ahmad S, Varshney RK, He B, Wen R. Physiological, molecular, and environmental insights into plant nitrogen uptake, and metabolism under abiotic stresses. in The Plant Genome. 2024;:e20461.
doi:10.1002/tpg2.20461 .

Akhtar, Kashif, ul Ain, Noor, Prasad, P. V. Vara, Naz, Misbah, Aslam, Mehtab Muhammad, Đalović, Ivica, Riaz, Muhammad, Ahmad, Shakeel, Varshney, Rajeev K., He, Bing, Wen, Ronghui, "Physiological, molecular, and environmental insights into plant nitrogen uptake, and metabolism under abiotic stresses" in The Plant Genome (2024):e20461,
https://doi.org/10.1002/tpg2.20461 . .

TY  - JOUR
AU  - Raza, Ali
AU  - Bashir, Shanza
AU  - Khare, Tushar
AU  - Karikari, Benjamin
AU  - Copeland, Rhys G. R.
AU  - Jamla, Monica
AU  - Abbas, Saghir
AU  - Charagh, Sidra
AU  - Nayak, Spurthi N.
AU  - Đalović, Ivica
AU  - Rivero, Rosa M.
AU  - Siddique, Kadambot H. M.
AU  - Varshney, Rajeev K.
PY  - 2024
UR  - http://fiver.ifvcns.rs/handle/123456789/4237
AB  - The adverse effects of mounting environmental challenges, including extreme temperatures, threaten the global food supply due to their impact on plant growth and productivity. Temperature extremes disrupt plant genetics, leading to significant growth issues and eventually damaging phenotypes. Plants have developed complex signaling networks to respond and tolerate temperature stimuli, including genetic, physiological, biochemical, and molecular adaptations. In recent decades, omics tools and other molecular strategies have rapidly advanced, offering crucial insights and a wealth of information about how plants respond and adapt to stress. This review explores the potential of an integrated omics-driven approach to understanding how plants adapt and tolerate extreme temperatures. By leveraging cutting-edge omics methods, including genomics, transcriptomics, proteomics, metabolomics, miRNAomics, epigenomics, phenomics, and ionomics, alongside the power of machine learning and speed breeding data, we can revolutionize plant breeding practices. These advanced techniques offer a promising pathway to developing climate-proof plant varieties that can withstand temperature fluctuations, addressing the increasing global demand for high-quality food in the face of a changing climate.
PB  - Wiley
T2  - Physiologia Plantarum
T1  - Temperature-smart plants: A new horizon with omics-driven plant breeding
IS  - 1
SP  - e14188
VL  - 176
DO  - 10.1111/ppl.14188
ER  - 

@article{
author = "Raza, Ali and Bashir, Shanza and Khare, Tushar and Karikari, Benjamin and Copeland, Rhys G. R. and Jamla, Monica and Abbas, Saghir and Charagh, Sidra and Nayak, Spurthi N. and Đalović, Ivica and Rivero, Rosa M. and Siddique, Kadambot H. M. and Varshney, Rajeev K.",
year = "2024",
abstract = "The adverse effects of mounting environmental challenges, including extreme temperatures, threaten the global food supply due to their impact on plant growth and productivity. Temperature extremes disrupt plant genetics, leading to significant growth issues and eventually damaging phenotypes. Plants have developed complex signaling networks to respond and tolerate temperature stimuli, including genetic, physiological, biochemical, and molecular adaptations. In recent decades, omics tools and other molecular strategies have rapidly advanced, offering crucial insights and a wealth of information about how plants respond and adapt to stress. This review explores the potential of an integrated omics-driven approach to understanding how plants adapt and tolerate extreme temperatures. By leveraging cutting-edge omics methods, including genomics, transcriptomics, proteomics, metabolomics, miRNAomics, epigenomics, phenomics, and ionomics, alongside the power of machine learning and speed breeding data, we can revolutionize plant breeding practices. These advanced techniques offer a promising pathway to developing climate-proof plant varieties that can withstand temperature fluctuations, addressing the increasing global demand for high-quality food in the face of a changing climate.",
publisher = "Wiley",
journal = "Physiologia Plantarum",
title = "Temperature-smart plants: A new horizon with omics-driven plant breeding",
number = "1",
pages = "e14188",
volume = "176",
doi = "10.1111/ppl.14188"
}

Raza, A., Bashir, S., Khare, T., Karikari, B., Copeland, R. G. R., Jamla, M., Abbas, S., Charagh, S., Nayak, S. N., Đalović, I., Rivero, R. M., Siddique, K. H. M.,& Varshney, R. K.. (2024). Temperature-smart plants: A new horizon with omics-driven plant breeding. in Physiologia Plantarum
Wiley., 176(1), e14188.
https://doi.org/10.1111/ppl.14188

Raza A, Bashir S, Khare T, Karikari B, Copeland RGR, Jamla M, Abbas S, Charagh S, Nayak SN, Đalović I, Rivero RM, Siddique KHM, Varshney RK. Temperature-smart plants: A new horizon with omics-driven plant breeding. in Physiologia Plantarum. 2024;176(1):e14188.
doi:10.1111/ppl.14188 .

Raza, Ali, Bashir, Shanza, Khare, Tushar, Karikari, Benjamin, Copeland, Rhys G. R., Jamla, Monica, Abbas, Saghir, Charagh, Sidra, Nayak, Spurthi N., Đalović, Ivica, Rivero, Rosa M., Siddique, Kadambot H. M., Varshney, Rajeev K., "Temperature-smart plants: A new horizon with omics-driven plant breeding" in Physiologia Plantarum, 176, no. 1 (2024):e14188,
https://doi.org/10.1111/ppl.14188 . .

TY  - JOUR
AU  - Buerstmayr, Hermann
AU  - Dreccer, Maria Fernanda
AU  - Miladinović, Dragana
AU  - Qiu, Lijuan
AU  - Rajcan, Istvan
AU  - Reif, Jochen
AU  - Varshney, Rajeev K.
AU  - Vollmann, Johann
PY  - 2022
UR  - http://fiver.ifvcns.rs/handle/123456789/4052
AB  - Humanity is facing enormous challenges in the years to come: sustainability of agriculture and sustainability of our supply with food, feed and renewable materials are neither granted nor free. Especially, but not only, in the Global South, a sustainable increase in agricultural productivity and a steady reduction of avoidable losses are undoubtedly key issues that need to be addressed. In order to pinpoint the most pressing challenges and strategies to achieve targets, the United Nations have formulated the Sustainable Development Goals (https://sdgs.un.org/goals). Among these, several are directly or indirectly addressing agriculture, food supply and sustainability, most notably SDG2 (zero hunger), SDG12 (responsible consumption and production), SDG13 (climate action) and SDG15 (life on land).
PB  - Springer
T2  - Theoretical and Applied Genetics
T1  - Plant breeding for increased sustainability: challenges, opportunities and progress
EP  - 3683
SP  - 3679
VL  - 135
DO  - 10.1007/s00122-022-04238-1
ER  - 

@article{
author = "Buerstmayr, Hermann and Dreccer, Maria Fernanda and Miladinović, Dragana and Qiu, Lijuan and Rajcan, Istvan and Reif, Jochen and Varshney, Rajeev K. and Vollmann, Johann",
year = "2022",
abstract = "Humanity is facing enormous challenges in the years to come: sustainability of agriculture and sustainability of our supply with food, feed and renewable materials are neither granted nor free. Especially, but not only, in the Global South, a sustainable increase in agricultural productivity and a steady reduction of avoidable losses are undoubtedly key issues that need to be addressed. In order to pinpoint the most pressing challenges and strategies to achieve targets, the United Nations have formulated the Sustainable Development Goals (https://sdgs.un.org/goals). Among these, several are directly or indirectly addressing agriculture, food supply and sustainability, most notably SDG2 (zero hunger), SDG12 (responsible consumption and production), SDG13 (climate action) and SDG15 (life on land).",
publisher = "Springer",
journal = "Theoretical and Applied Genetics",
title = "Plant breeding for increased sustainability: challenges, opportunities and progress",
pages = "3683-3679",
volume = "135",
doi = "10.1007/s00122-022-04238-1"
}

Buerstmayr, H., Dreccer, M. F., Miladinović, D., Qiu, L., Rajcan, I., Reif, J., Varshney, R. K.,& Vollmann, J.. (2022). Plant breeding for increased sustainability: challenges, opportunities and progress. in Theoretical and Applied Genetics
Springer., 135, 3679-3683.
https://doi.org/10.1007/s00122-022-04238-1

Buerstmayr H, Dreccer MF, Miladinović D, Qiu L, Rajcan I, Reif J, Varshney RK, Vollmann J. Plant breeding for increased sustainability: challenges, opportunities and progress. in Theoretical and Applied Genetics. 2022;135:3679-3683.
doi:10.1007/s00122-022-04238-1 .

Buerstmayr, Hermann, Dreccer, Maria Fernanda, Miladinović, Dragana, Qiu, Lijuan, Rajcan, Istvan, Reif, Jochen, Varshney, Rajeev K., Vollmann, Johann, "Plant breeding for increased sustainability: challenges, opportunities and progress" in Theoretical and Applied Genetics, 135 (2022):3679-3683,
https://doi.org/10.1007/s00122-022-04238-1 . .